Banner

GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs911119 1 rs13039536 chr20:23612305 CST9 chr20:23583049-23586610:- -0.51 -4.71 8.44E-6 Chronic kidney disease
THYM cis rs911119 1 rs13041070 chr20:23614261 CST9 chr20:23583049-23586610:- -0.51 -4.71 8.44E-6 Chronic kidney disease
THYM cis rs10935120 1 rs13059720 chr3:134242021 ANAPC13 chr3:134196547-134204865:- -0.59 -8.13 1.58E-12 Height
THYM cis rs10935120 1 rs13059720 chr3:134242021 CEP63 chr3:134204575-134293852:+ -0.41 -5.87 6.33E-8 Height
THYM cis rs9876781 1 rs13069724 chr3:48478039 TREX1 chr3:48501186-48509043:+ -0.28 -4.14 7.54E-5 Longevity
THYM cis rs9876781 1 rs13071337 chr3:48438189 TREX1 chr3:48501186-48509043:+ -0.28 -4.38 3.02E-5 Longevity
THYM cis rs10935120 1 rs13071551 chr3:134310867 ANAPC13 chr3:134196547-134204865:- -0.59 -8.1 1.9E-12 Height
THYM cis rs10935120 1 rs13071551 chr3:134310867 CEP63 chr3:134204575-134293852:+ -0.41 -5.93 4.96E-8 Height
THYM cis rs13073838 1 rs13073838 chr3:74627703 CNTN3 chr3:74311722-74570343:- 0.47 4.82 5.5E-6 Economic and political preferences
THYM cis rs3796352 1 rs13076033 chr3:52898427 ITIH4 chr3:52847007-52866554:- -0.52 -4.62 1.21E-5 Immune reponse to smallpox (secreted IL-2)
THYM cis rs9876781 1 rs13076076 chr3:48479039 TREX1 chr3:48501186-48509043:+ -0.29 -4.26 4.8E-5 Longevity
THYM cis rs10935120 1 rs13081177 chr3:134289860 ANAPC13 chr3:134196547-134204865:- -0.59 -8.13 1.58E-12 Height
THYM cis rs10935120 1 rs13081177 chr3:134289860 CEP63 chr3:134204575-134293852:+ -0.41 -5.87 6.33E-8 Height
THYM cis rs10935120 1 rs13081688 chr3:134259954 ANAPC13 chr3:134196547-134204865:- -0.59 -8.13 1.58E-12 Height
THYM cis rs10935120 1 rs13081688 chr3:134259954 CEP63 chr3:134204575-134293852:+ -0.41 -5.87 6.33E-8 Height